论文标题
分子生物学的量子计算
Quantum Computing for Molecular Biology
论文作者
论文摘要
分子生物学和生物化学以分子结构及其相互作用来解释生活世界中的微观过程,它们本质上是量子机械的。尽管这些相互作用的理论基础已经很好地确定,但相关量子机械方程的计算解决方案非常困难。但是,可以从经典力学方面理解生物学中的许多分子功能,在经典力学上,电子和核的相互作用已映射到有效的经典替代电位上,该电位模拟了原子甚至更大实体的相互作用。这些潜力的简单数学结构具有巨大的计算优势。但是,这是省略了所有量子相关性和相互作用的严格多粒子性质的代价。在这项工作中,我们讨论量子计算如何通过为生物分子模拟提供计算优势来提高分子生物学的量子基础的实际实用性。我们不仅讨论了这种情况下生物分子电子结构的典型量子机械问题,而且还考虑了主导的经典问题(例如蛋白质折叠和药物设计),以及生物信息学的数据驱动方法以及它们可能与量子模拟和量子计算的程度。
Molecular biology and biochemistry interpret microscopic processes in the living world in terms of molecular structures and their interactions, which are quantum mechanical by their very nature. Whereas the theoretical foundations of these interactions are very well established, the computational solution of the relevant quantum mechanical equations is very hard. However, much of molecular function in biology can be understood in terms of classical mechanics, where the interactions of electrons and nuclei have been mapped onto effective classical surrogate potentials that model the interaction of atoms or even larger entities. The simple mathematical structure of these potentials offers huge computational advantages; however, this comes at the cost that all quantum correlations and the rigorous many-particle nature of the interactions are omitted. In this work, we discuss how quantum computation may advance the practical usefulness of the quantum foundations of molecular biology by offering computational advantages for simulations of biomolecules. We not only discuss typical quantum mechanical problems of the electronic structure of biomolecules in this context, but also consider the dominating classical problems (such as protein folding and drug design) as well as data-driven approaches of bioinformatics and the degree to which they might become amenable to quantum simulation and quantum computation.